Package: OmicsPrepR 0.1.0
OmicsPrepR: Unified Preprocessing Toolkit for Proteomics and Metabolomics
An integrated R package providing unified workflows for quality control, normalization, and visualization of proteomic and metabolomic data. The package simplifies preprocessing through automated imputation, scaling, and PCA-based exploratory analysis, enabling researchers to prepare omics datasets efficiently for downstream statistical and machine learning analyses.
Authors:
OmicsPrepR_0.1.0.tar.gz
OmicsPrepR_0.1.0.zip(r-4.7)OmicsPrepR_0.1.0.zip(r-4.6)OmicsPrepR_0.1.0.zip(r-4.5)
OmicsPrepR_0.1.0.tgz(r-4.6-any)OmicsPrepR_0.1.0.tgz(r-4.5-any)
OmicsPrepR_0.1.0.tar.gz(r-4.7-any)OmicsPrepR_0.1.0.tar.gz(r-4.6-any)
OmicsPrepR_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
OmicsPrepR/json (API)
| # Install 'OmicsPrepR' in R: |
| install.packages('OmicsPrepR', repos = c('https://ikemillar.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ikemillar/omicsprepr/issues
Last updated from:0a004715a6. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 119 | ||
| source / vignettes | OK | 152 | ||
| linux-release-x86_64 | OK | 115 | ||
| macos-release-arm64 | OK | 164 | ||
| macos-oldrel-arm64 | OK | 158 | ||
| windows-devel | OK | 88 | ||
| windows-release | OK | 85 | ||
| windows-oldrel | OK | 81 | ||
| wasm-release | OK | 99 |
Exports:export_cleanimpute_missingintegrate_omicsload_omicsnormalize_omics
Dependencies:clicpp11farverggplot2gluegtableisobandlabelinglifecycleR6RColorBrewerrlangS7scalesvctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Export Cleaned Omics Data | export_clean |
| Impute Missing Values in Omics Data | impute_missing |
| Integrate Proteomic and Metabolomic Data | integrate_omics |
| Load Proteomics or Metabolomics Data | load_omics |
| Normalize Omics Data | normalize_omics |
